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The Pathologist / Issues / 2025 / November / Whole-Genome Sequencing Assay Detects HPV / Summary
Infectious Disease Liquid biopsy Omics Research and Innovations Molecular Pathology

Whole-Genome Sequencing Assay Detects HPV

HPV-DeepSeek identifies circulating HPV DNA, PIK3CA mutations, and integration events in pretreatment blood samples with high sensitivity and specificity.

By Jim Gallagher 11/28/2025 News 3 min read
article Full Article Summary Notecard

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HPV-DeepSeek, a next-generation liquid biopsy test, shows exceptional sensitivity (98.7 percent) and specificity (99.1 percent) for detecting HPV-related circulating tumor DNA in over 400 patients. Presented by Adam S. Fisch at the AMP 2025 meeting, the assay targets 43 HPV genotypes and has potential applications in early diagnosis, treatment monitoring, and assessment of residual disease across various cancer types, including oropharyngeal and cervical cancers, while providing insights into specific mutations and viral integration patterns.

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About the Author(s)

Jim Gallagher

Senior Managing Editor, Conexiant

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